C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: armadillo repeat containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029125 Armc1-201 ENSMUSG00000027599 10090 - 3:19132146-19163065 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029125
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029125 6.133±0.62 3.891±0.15 12.644±1.94 10.188±2.49 4.351±0.61 2.871±0.48 6.112±0.57 7.095±1.24 8.910±4.55 3.927±0.60 5.930±0.97 4.220±2.00 9.209±4.31 1.768±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003G9 CIL_0003G9_0002 CGP 3:18071950-19163065
CIL_0005LS CIL_0005LS_0003 CGP 3:19132146-19220817

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process
GO:0030001 IEA metal ion transport
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276569 ARMC1-001 protein_coding Homo_sapiens 0 1541
ENST00000458464 ARMC1-201 protein_coding Homo_sapiens 0 865
ENST00000506991 RP11-310A13.2-001 processed_pseudogene Homo_sapiens 0 839
ENST00000518908 ARMC1-004 protein_coding Homo_sapiens 0 793
ENST00000519352 ARMC1-003 protein_coding Homo_sapiens 0 516
ENST00000523384 ARMC1-005 processed_transcript Homo_sapiens 0 322
ENST00000528721 ARMC1-002 nonsense_mediated_decay Homo_sapiens 0 520

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