C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: matrix metallopeptidase 24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029141 Mmp24-001 ENSMUSG00000027612 10090 + 2:155775342-155818366 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainTestisENSMUST00000029141
Transcript ID Brain Testis
ENSMUST00000029141 11.410±6.17 0.896±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008EI CIL_0008EI_0002 VISTA 2:155562263-156164147
CIL_00030R CIL_00030R_0002 CGP 2:155751117-155818366
CIL_0002HV CIL_0002HV_0002 CGP 2:155775342-155826925

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004222 IDA metalloendopeptidase activity
GO:0005509 IEA calcium ion binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0005887 IDA integral component of plasma membrane
GO:0006508 IMP proteolysis
GO:0008270 IEA zinc ion binding
GO:0010001 IDA glial cell differentiation
GO:0032588 IDA trans-Golgi network membrane
GO:0044331 IDA cell-cell adhesion mediated by cadherin
GO:0045296 IPI cadherin binding
GO:0050965 IMP detection of temperature stimulus involved in sensory perception of pain
GO:0070062 IEA extracellular vesicular exosome
GO:0097150 IDA neuronal stem cell maintenance
GO:0098609 IMP cell-cell adhesion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000047399 mmp24-001 protein_coding Danio_rerio 0 905
ENST00000246186 MMP24-001 protein_coding Homo_sapiens 0 3171

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