C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: suppressor of Ty 20
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029315 Supt20-202 ENSMUSG00000095832 10090 + 3:54692823-54728762 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000029315
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000029315 17.833±4.97 16.850±1.04 19.022±2.22 34.775±7.97 22.925±5.65 20.038±2.60 4.832±1.92 10.902±4.16 11.698±5.09 21.798±4.89 24.968±10.42 12.684±2.28 59.439±17.17

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000124 IEA SAGA complex
GO:0003712 IEA transcription cofactor activity
GO:0035948 IGI positive regulation of gluconeogenesis by positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000350612 SUPT20H-016 protein_coding Homo_sapiens 0 457
ENST00000469488 SUPT20H-009 protein_coding Homo_sapiens 0 713
ENST00000472948 SUPT20H-024 retained_intron Homo_sapiens 0 296
ENST00000475892 SUPT20H-021 protein_coding Homo_sapiens 0 617
ENST00000484078 SUPT20H-019 retained_intron Homo_sapiens 0 457
ENST00000490716 SUPT20H-018 nonsense_mediated_decay Homo_sapiens 0 1247
ENST00000495071 SUPT20H-013 nonsense_mediated_decay Homo_sapiens 0 1247

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