C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEAH (Asp-Glu-Ala-His) box polypeptide 36
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029336 Dhx36-001 ENSMUSG00000027770 10090 - 3:62470039-62507004 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029336
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029336 2.717±1.87 1.448±0.92 2.277±0.18 14.839±0.00 2.530±0.85 4.471±2.09 1.832±1.25 2.627±0.61 6.032±3.02 2.772±0.00 3.256±0.58 5.670±2.08 8.126±3.46 5.009±1.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066Q CIL_00066Q_0002 CGP 3:62338344-62507004
CIL_00066D CIL_00066D_0002 CGP 3:62470039-62605140

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000781 IEA chromosome, telomeric region
GO:0001047 ISS core promoter binding
GO:0001503 IMP ossification
GO:0002151 ISS G-quadruplex RNA binding
GO:0003725 ISO double-stranded RNA binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006200 IEA ATP catabolic process
GO:0006351 IEA transcription, DNA-templated
GO:0008026 IEA ATP-dependent helicase activity
GO:0008094 ISS DNA-dependent ATPase activity
GO:0009615 IMP response to virus
GO:0010501 ISS RNA secondary structure unwinding
GO:0032206 ISS positive regulation of telomere maintenance
GO:0042826 IDA histone deacetylase binding
GO:0043330 IMP response to exogenous dsRNA
GO:0044212 IDA transcription regulatory region DNA binding
GO:0044822 IEA poly(A) RNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0051880 ISS G-quadruplex DNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000308361 DHX36-002 protein_coding Homo_sapiens 0 2577
ENST00000329463 DHX36-003 protein_coding Homo_sapiens 0 1917
ENST00000460695 DHX36-005 retained_intron Homo_sapiens 0 357
ENST00000460875 DHX36-011 retained_intron Homo_sapiens 0 425
ENST00000469977 DHX36-008 protein_coding Homo_sapiens 0 532
ENST00000477549 DHX36-009 retained_intron Homo_sapiens 0 351
ENST00000479934 DHX36-013 nonsense_mediated_decay Homo_sapiens 0 442
ENST00000481332 DHX36-012 retained_intron Homo_sapiens 0 555
ENST00000481941 DHX36-004 protein_coding Homo_sapiens 0 3088
ENST00000491011 DHX36-006 retained_intron Homo_sapiens 0 427
ENST00000495598 DHX36-010 retained_intron Homo_sapiens 0 577
ENST00000496811 DHX36-001 protein_coding Homo_sapiens 0 3864

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