C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synaptotagmin X
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029441 Syt10-001 ENSMUSG00000063260 10090 - 15:89782393-89841860 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLungOvaryPlacentaTestisENSMUST00000029441
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Lung Ovary Placenta Testis
ENSMUST00000029441 0.023±0.00 0.118±0.02 0.056±0.01 5.041±0.00 0.093±0.05 0.024±0.01 0.034±0.01 0.558±0.09 0.600±0.25 0.004±0.00 0.300±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006HN CIL_0006HN_0002 CGP 15:89782393-90230554

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005515 IPI protein binding
GO:0006810 IEA transport
GO:0008021 IEA synaptic vesicle
GO:0016021 IEA integral component of membrane
GO:0017158 IEA regulation of calcium ion-dependent exocytosis
GO:0030054 IEA cell junction
GO:0042802 IPI identical protein binding
GO:0042803 IDA protein homodimerization activity
GO:0046872 IEA metal ion binding
GO:0046982 IPI protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000228567 SYT10-001 protein_coding Homo_sapiens 0 1836
ENST00000539102 SYT10-002 nonsense_mediated_decay Homo_sapiens 0 1284

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