C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006HN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000110975-ENSG00000139133 CGP 9606 12:33374238-34029694
GeneTranscriptPositionBiotype
ENSG00000110975 (SYT10)
synaptotagmin X 		ENST00000228567 (SYT10-001) 33374238-33439819 protein_coding
ENST00000539102 (SYT10-002) 33376273-33439646 nonsense_mediated_decay
ENST00000567656 (SYT10-003) 33407798-33426160 processed_transcript
ENSG00000139133 (ALG10)
ALG10, alpha-1,2-glucosyltransferase 		ENST00000266483 (ALG10-001) 34022281-34028302 protein_coding
ENST00000538927 (ALG10-004) 34022468-34029694 protein_coding
ENST00000541178 (ALG10-003) 34022473-34026152 retained_intron
ENST00000541875 (ALG10-002) 34022473-34027029 nonsense_mediated_decay
ENSG00000245482 (RP11-847H18.2)
 ENST00000501954 (RP11-847H18.2-001) 34022281-34046417 antisense
ENSG00000256070 (RP11-56H16.1)
 ENST00000393026 (RP11-56H16.1-001) 33454345-33455452 processed_pseudogene
ENSG00000259937 (RP11-438D14.2)
 ENST00000561632 (RP11-438D14.2-001) 33404872-33405896 sense_intronic
ENSG00000273853 (RP11-438D14.3)
 ENST00000614876 (RP11-438D14.3-001) 33432311-33432853 sense_intronic
CIL_0006HN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000063260-ENSMUSG00000075470 CGP 10090 15:89782393-90230554
GeneTranscriptPositionBiotype
ENSMUSG00000063260 (Syt10)
synaptotagmin X 		ENSMUST00000029441 (Syt10-001) 89782393-89841860 protein_coding
ENSMUSG00000075470 (Alg10b)
asparagine-linked glycosylation 10B (alpha-1,2-glucosyltransferase) 		ENSMUST00000100309 (Alg10b-201) 90224311-90230554 protein_coding
ENSMUSG00000096784 (Gm24643)
predicted gene, 24643 		ENSMUST00000178305 (Gm24643-201) 89888952-89889052 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006HN_0001ENSG00000110975ENST00000228567ENST00000539102ENST00000567656ENSG00000139133ENST00000266483ENST00000538927ENST00000541178ENST00000541875ENSG00000245482ENST00000501954ENSG00000256070ENST00000393026ENSG00000259937ENST00000561632ENSG00000273853ENST00000614876CIL_0006HN_0002ENSMUSG00000063260ENSMUST00000029441ENSMUSG00000075470ENSMUST00000100309ENSMUSG00000096784ENSMUST00000178305
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006HN_0001ENSG00000110975ENST00000228567ENST00000539102ENST00000567656ENSG00000139133ENST00000266483ENST00000541875ENSG00000245482ENST00000501954ENSG00000256070ENST00000393026ENSG00000259937ENST00000561632ENSG00000273853ENST00000614876CIL_0006HN_0002ENSMUSG00000063260ENSMUST00000029441ENSMUSG00000075470ENSMUST00000100309ENSMUSG00000096784ENSMUST00000178305
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000110975 ENST00000228567 N/A N/A N/A N/A 0.018±0.00 0.159±0.00 N/A 0.445±0.00 0.013±0.00 N/A N/A N/A N/A N/A
ENST00000539102 N/A 0.031±0.00 N/A 0.073±0.00 0.025±0.00 0.049±0.00 0.008±0.00 N/A 0.019±0.00 0.097±0.00 N/A 0.033±0.00 0.017±0.00 0.129±0.09
ENST00000567656 N/A 0.149±0.00 N/A N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000139133 ENST00000266483 0.625±0.00 N/A N/A N/A 0.635±0.28 0.333±0.21 0.230±0.06 0.210±0.00 0.026±0.00 0.111±0.00 N/A 0.219±0.09 0.357±0.01 0.399±0.01
ENST00000538927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541875 N/A N/A 1.017±0.00 N/A N/A 0.573±0.00 N/A N/A N/A 0.319±0.21 N/A 0.519±0.39 0.303±0.11 0.914±0.00
ENSG00000245482 ENST00000501954 N/A 0.057±0.00 N/A 0.341±0.00 0.094±0.00 N/A 0.041±0.00 0.170±0.00 N/A 0.172±0.00 0.108±0.00 N/A 0.107±0.00 0.150±0.00
ENSG00000256070 ENST00000393026 0.011±0.00 N/A 0.030±0.00 N/A 0.012±0.00 N/A 0.028±0.00 0.012±0.00 N/A N/A N/A N/A N/A 0.011±0.00
ENSG00000259937 ENST00000561632 N/A N/A N/A 0.147±0.08 N/A 0.045±0.00 N/A 0.172±0.00 N/A N/A N/A 0.031±0.00 N/A 0.124±0.07
ENSG00000273853 ENST00000614876 N/A N/A N/A 0.052±0.00 N/A 0.128±0.00 N/A 0.025±0.00 N/A N/A N/A N/A N/A 0.087±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000063260 ENSMUST00000029441 0.023±0.00 0.118±0.02 0.056±0.01 5.041±0.00 N/A 0.093±0.05 0.024±0.01 0.034±0.01 N/A 0.558±0.09 N/A 0.600±0.25 0.004±0.00 0.300±0.04
ENSMUSG00000075470 ENSMUST00000100309 4.354±0.93 17.140±2.78 N/A 2.319±0.00 7.185±1.86 6.998±0.60 2.814±1.52 5.976±3.00 7.850±0.79 6.442±2.74 N/A 16.004±4.86 1.535±0.64 1.558±0.76
ENSMUSG00000096784 ENSMUST00000178305 N/A N/A 32.385±0.00 33.517±0.00 N/A N/A N/A N/A 16.932±0.00 N/A N/A N/A N/A N/A

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