C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029463 Hsd3b6-001 ENSMUSG00000027869 10090 - 3:98805504-98814443 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverOvaryPlacentaTestisENSMUST00000029463
Transcript ID Adrenal Brain Breast Colon Kidney Liver Ovary Placenta Testis
ENSMUST00000029463 20.847±3.84 0.300±0.06 0.204±0.08 0.032±0.00 0.040±0.00 8.733±9.30 0.441±0.17 16.993±14.67 30.072±14.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IA CIL_0005IA_0004 CGP 3:98741524-98814443
CIL_0005IA CIL_0005IA_0002 CGP 3:98805504-98859794

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003854 IEA 3-beta-hydroxy-delta5-steroid dehydrogenase activity
GO:0004769 IEA steroid delta-isomerase activity
GO:0005739 IEA mitochondrion
GO:0005783 IEA endoplasmic reticulum
GO:0006694 IEA steroid biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369416 HSD3B2-001 protein_coding Homo_sapiens 0 641
ENST00000457615 HSD3BP2-001 unprocessed_pseudogene Homo_sapiens 0 638
ENST00000511509 HSD3BP4-001 unprocessed_pseudogene Homo_sapiens 0 608
ENST00000543831 HSD3B2-201 protein_coding Homo_sapiens 0 641

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