C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000369416 HSD3B2-001 ENSG00000203859 9606 + 1:119415084-119423034 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastLiverOvaryPlacentaTestisENST00000369416
Transcript ID Adrenal Brain Breast Liver Ovary Placenta Testis
ENST00000369416 0.071±0.00 0.068±0.00 0.185±0.00 0.071±0.00 75.703±103.28 1.812±1.15 0.724±0.39

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IA CIL_0005IA_0001 CGP 1:119414931-119515054

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0003854 IEA:IDA 3-beta-hydroxy-delta5-steroid dehydrogenase activity
GO:0004769 IDA steroid delta-isomerase activity
GO:0005743 ISS mitochondrial inner membrane
GO:0005758 ISS mitochondrial intermembrane space
GO:0005783 NAS endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0006694 IEA:IDA steroid biosynthetic process
GO:0006702 TAS androgen biosynthetic process
GO:0006704 TAS glucocorticoid biosynthetic process
GO:0006705 TAS mineralocorticoid biosynthetic process
GO:0008152 IEA metabolic process
GO:0008202 TAS steroid metabolic process
GO:0009058 IEA biosynthetic process
GO:0016021 NAS integral component of membrane
GO:0016491 IEA oxidoreductase activity
GO:0016616 IEA oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
GO:0030868 ISS smooth endoplasmic reticulum membrane
GO:0031966 NAS mitochondrial membrane
GO:0044281 TAS small molecule metabolic process
GO:0050662 IEA coenzyme binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107021 Hsd3b2-002 protein_coding Mus_musculus 0 675
ENSMUST00000107022 Hsd3b2-001 protein_coding Mus_musculus 0 675
ENSMUST00000177651 Hsd3b2-201 protein_coding Mus_musculus 0 673
ENSMUST00000090743 Hsd3b3-201 protein_coding Mus_musculus 0 664
ENSMUST00000107018 Hsd3b3-001 protein_coding Mus_musculus 0 664
ENSMUST00000107019 Hsd3b3-002 protein_coding Mus_musculus 0 664
ENSMUST00000170847 Hsd3b6-201 protein_coding Mus_musculus 0 641
ENSMUST00000029463 Hsd3b6-001 protein_coding Mus_musculus 0 641
ENSMUST00000167753 Gm4450-001 protein_coding Mus_musculus 0 590
ENSMUST00000058728 Gm10681-201 protein_coding Mus_musculus 0 590
ENSMUST00000178221 Gm10681-202 protein_coding Mus_musculus 0 590
ENSMUST00000179429 Hsd3b4-201 protein_coding Mus_musculus 0 590
ENSMUST00000094050 Hsd3b3-202 protein_coding Mus_musculus 0 494
ENSMUST00000186215 Gm4450-002 nonsense_mediated_decay Mus_musculus 0 414

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