C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: S100 calcium binding protein A11 (calgizzarin)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029515 S100a11-001 ENSMUSG00000027907 10090 + 3:93520488-93526287 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029515
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029515 409.540±186.85 31.231±5.76 414.490±5.84 19.085±13.71 165.567±53.08 62.386±11.56 38.231±10.01 115.768±20.13 33.528±35.15 169.581±15.57 20.830±4.86 105.735±144.39 416.874±346.53 10.674±4.65

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001726 IEA ruffle
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding
GO:0005615 IEA extracellular space
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0042127 IEA regulation of cell proliferation
GO:0042803 IEA protein homodimerization activity
GO:0044548 IEA S100 protein binding
GO:0048306 IEA calcium-dependent protein binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000271638 S100A11-001 protein_coding Homo_sapiens 0 255
ENST00000477525 S100A11P1-001 processed_pseudogene Homo_sapiens 0 241
ENST00000478109 S100A11-002 processed_transcript Homo_sapiens 0 255
ENST00000487308 AC006483.5-001 processed_pseudogene Homo_sapiens 0 193
ENST00000532468 RP11-684B2.3-001 processed_pseudogene Homo_sapiens 8.96831e-44 180

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