C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: S100 calcium binding protein A11 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477525 S100A11P1-001 ENSG00000237632 9606 + 7:103262000-103262311 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastLungOvaryTestisENST00000477525
Transcript ID Adrenal Breast Lung Ovary Testis
ENST00000477525 0.054±0.00 0.055±0.00 0.253±0.00 0.114±0.00 0.082±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005CJ CIL_0005CJ_0001 CGP 7:103099776-103329511

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029515 S100a11-001 protein_coding Mus_musculus 0 241
ENSMUST00000076710 Gm7665-001 processed_pseudogene Mus_musculus 0 235
ENSMUST00000128518 Gm12854-001 processed_pseudogene Mus_musculus 0 230
ENSMUST00000181735 Gm5068-001 processed_pseudogene Mus_musculus 0 220
ENSMUST00000118445 Gm13640-001 processed_pseudogene Mus_musculus 4.99997e-41 171

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