C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spindle assembly 6 homolog (C. elegans)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029571 Sass6-201 ENSMUSG00000027959 10090 + 3:116595008-116630984 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000029571
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000029571 1.420±0.04 0.437±0.12 0.980±0.11 2.264±0.71 0.712±0.00 0.658±0.17 0.387±0.07 2.414±2.36 1.005±0.20 0.977±0.36 2.079±1.20 8.678±1.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006G0 CIL_0006G0_0002 CGP 3:116562973-116614587

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005813 ISO centrosome
GO:0005814 ISO centriole
GO:0007099 IEA centriole replication
GO:0051298 IEA centrosome duplication
GO:0098536 IDA deuterosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000081191 sass6-001 protein_coding Danio_rerio 4e-18 99
ENST00000287482 SASS6-001 protein_coding Homo_sapiens 0 1853
ENST00000462159 SASS6-002 processed_transcript Homo_sapiens 0 1014

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