C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006G0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000071465-ENSDARG00000042701 CGP 7955 22:16522107-16533256
GeneTranscriptPositionBiotype
ENSDARG00000042701 (trmt13)
tRNA methyltransferase 13 homolog (S. cerevisiae) 		ENSDART00000148587 (trmt13-001) 16525380-16533256 protein_coding
ENSDART00000150223 (trmt13-002) 16527785-16533101 processed_transcript
ENSDARG00000071465 (lrrc39)
leucine rich repeat containing 39 		ENSDART00000105678 (lrrc39-001) 16522107-16525842 protein_coding
ENSDARG00000095945 (trmt13)
 ENSDART00000148641 (trmt13-002) 16527785-16533101 processed_transcript
CIL_0006G0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027961-ENSMUSG00000033439 CGP 10090 3:116562973-116614587
GeneTranscriptPositionBiotype
ENSMUSG00000027959 (Sass6)
spindle assembly 6 homolog (C. elegans) 		ENSMUST00000029571 (Sass6-201) 116595008-116630984 protein_coding
ENSMUSG00000027961 (Lrrc39)
leucine rich repeat containing 39 		ENSMUST00000029573 (Lrrc39-001) 116562978-116583134 protein_coding
ENSMUST00000123785 (Lrrc39-002) 116562973-116573112 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006G0_0001ENSDARG00000042701ENSDART00000148587ENSDART00000150223ENSDARG00000071465ENSDART00000105678ENSDARG00000095945ENSDART00000148641CIL_0006G0_0002ENSMUSG00000027959ENSMUST00000029571ENSMUSG00000027961ENSMUST00000029573ENSMUST00000123785
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006G0_0001ENSDARG00000042701ENSDART00000148587ENSDARG00000071465ENSDART00000105678ENSDARG00000095945ENSDART00000148641CIL_0006G0_0002ENSMUSG00000027959ENSMUST00000029571ENSMUSG00000027961ENSMUST00000029573ENSMUST00000123785
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000042701 ENSDART00000148587 N/A N/A N/A 3.853±0.73 N/A N/A 3.523±3.26 2.993±1.92 0.655±0.00 N/A 1.674±0.00 N/A N/A N/A
ENSDART00000150223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000071465 ENSDART00000105678 N/A N/A N/A N/A N/A N/A 21.945±12.72 0.913±0.00 N/A N/A 7.197±0.00 N/A N/A N/A
ENSDARG00000095945 ENSDART00000148641 N/A N/A N/A N/A N/A N/A N/A 1.357±0.21 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027959 ENSMUST00000029571 1.420±0.04 0.437±0.12 0.980±0.11 2.264±0.71 0.712±0.00 0.658±0.17 N/A 0.387±0.07 2.414±2.36 1.005±0.20 N/A 0.977±0.36 2.079±1.20 8.678±1.75
ENSMUSG00000027961 ENSMUST00000029573 2.314±1.23 0.505±0.18 N/A N/A 3.133±1.64 N/A 9.913±1.94 0.305±0.05 1.748±1.03 0.855±0.17 8.701±2.92 0.804±0.33 1.430±0.33 N/A
ENSMUST00000123785 2.137±0.14 0.505±0.00 N/A N/A N/A N/A N/A 0.258±0.00 N/A N/A N/A 0.529±0.00 N/A N/A

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