C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: threonyl-tRNA synthetase 2, mitochondrial (putative)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029752 Tars2-201 ENSMUSG00000028107 10090 - 3:95739976-95754977 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029752
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029752 12.352±1.57 14.942±2.14 12.878±2.00 13.678±1.45 11.493±0.79 7.756±1.39 12.651±0.39 12.164±0.51 12.355±2.90 8.466±1.02 8.766±0.89 10.288±2.81 8.528±1.75 8.712±0.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00053N CIL_00053N_0002 CGP 3:95739976-95818953

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004829 IEA threonine-tRNA ligase activity
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006435 IEA threonyl-tRNA aminoacylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369051 TARS2-012 nonsense_mediated_decay Homo_sapiens 0 1107
ENST00000369054 TARS2-010 protein_coding Homo_sapiens 0 1109
ENST00000369064 TARS2-001 protein_coding Homo_sapiens 0 2074
ENST00000438568 TARS2-201 protein_coding Homo_sapiens 0 1107
ENST00000462578 TARS2-004 retained_intron Homo_sapiens 0 390
ENST00000463555 TARS2-006 processed_transcript Homo_sapiens 0 634
ENST00000467982 TARS2-008 nonsense_mediated_decay Homo_sapiens 0 915
ENST00000480070 TARS2-005 processed_transcript Homo_sapiens 0 634
ENST00000483046 TARS2-009 processed_transcript Homo_sapiens 0 268
ENST00000606933 TARS2-013 protein_coding Homo_sapiens 0 1107

Loading