C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00053N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000089680-ENSDARG00000074676 CGP 7955 16:1211451-1237821
GeneTranscriptPositionBiotype
ENSDARG00000074676 (rprd2b)
regulation of nuclear pre-mRNA domain containing 2b 		ENSDART00000112345 (rprd2b-201) 1225187-1237821 protein_coding
ENSDARG00000089680 (TARSL2 (2 of 2))
threonyl-tRNA synthetase 2, mitochondrial (putative) 		ENSDART00000130552 (TARSL2 (2 of 2)-201) 1211451-1215528 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00053N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028107-ENSMUSG00000028106 CGP 10090 3:95739976-95818953
GeneTranscriptPositionBiotype
ENSMUSG00000028106 (Rprd2)
regulation of nuclear pre-mRNA domain containing 2 		ENSMUST00000090791 (Rprd2-201) 95759873-95818953 protein_coding
ENSMUSG00000028107 (Tars2)
threonyl-tRNA synthetase 2, mitochondrial (putative) 		ENSMUST00000029752 (Tars2-201) 95739976-95754977 protein_coding
ENSMUST00000074339 (Tars2-202) 95739976-95754977 protein_coding
ENSMUST00000098857 (Tars2-203) 95743853-95754977 protein_coding
ENSMUST00000163530 (Tars2-204) 95739976-95754977 protein_coding
ENSMUSG00000089493 (Gm26361)
predicted gene, 26361 		ENSMUST00000158868 (Gm26361-201) 95796699-95796884 snRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00053N_0001ENSDARG00000074676ENSDART00000112345ENSDARG00000089680ENSDART00000130552CIL_00053N_0002ENSMUSG00000028106ENSMUST00000090791ENSMUSG00000028107ENSMUST00000029752ENSMUST00000074339ENSMUST00000098857ENSMUST00000163530ENSMUSG00000089493ENSMUST00000158868
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00053N_0001ENSDARG00000074676ENSDART00000112345ENSDARG00000089680ENSDART00000130552CIL_00053N_0002ENSMUSG00000028106ENSMUST00000090791ENSMUSG00000028107ENSMUST00000029752ENSMUST00000074339ENSMUST00000098857ENSMUST00000163530ENSMUSG00000089493ENSMUST00000158868
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000074676 ENSDART00000112345 N/A N/A N/A 5.985±0.59 N/A N/A 1.174±0.87 2.717±0.48 0.175±0.00 N/A 1.044±0.00 N/A N/A N/A
ENSDARG00000089680 ENSDART00000130552 N/A N/A N/A 11.839±0.00 N/A N/A 5.517±1.04 2.900±0.00 1.548±0.00 N/A 3.783±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028106 ENSMUST00000090791 2.040±1.05 5.095±0.43 4.758±0.18 7.560±2.20 2.702±1.95 4.533±0.94 1.286±0.29 2.304±1.53 2.575±0.82 3.342±1.73 1.213±0.00 3.721±2.47 2.768±1.63 3.215±1.82
ENSMUSG00000028107 ENSMUST00000029752 12.352±1.57 14.942±2.14 12.878±2.00 13.678±1.45 11.493±0.79 7.756±1.39 12.651±0.39 12.164±0.51 12.355±2.90 8.466±1.02 8.766±0.89 10.288±2.81 8.528±1.75 8.712±0.87
ENSMUST00000074339 N/A N/A N/A 16.138±0.00 N/A N/A N/A N/A N/A N/A N/A 30.228±0.00 22.556±0.00 N/A
ENSMUST00000098857 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.126±0.08 N/A N/A
ENSMUST00000163530 N/A 5.082±0.71 N/A 7.326±0.00 3.228±0.00 3.292±1.13 N/A N/A 2.312±0.69 2.054±0.06 N/A 3.796±0.58 11.401±0.00 N/A
ENSMUSG00000089493 ENSMUST00000158868 N/A N/A N/A 0.562±0.00 N/A N/A N/A N/A 1.335±0.00 N/A N/A N/A 0.347±0.00 N/A

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