C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: methionyl aminopeptidase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029804 Metap1-201 ENSMUSG00000005813 10090 - 3:138458960-138489382 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029804
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029804 9.658±0.91 5.232±1.13 19.497±2.42 15.762±2.20 9.857±2.59 9.143±1.93 11.682±0.78 12.204±0.85 14.581±6.26 8.553±1.45 22.250±1.18 10.504±4.25 33.021±7.46 8.949±3.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008LO CIL_0008LO_0002 VISTA 3:138442669-139045155

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0006508 IEA proteolysis
GO:0022626 IEA cytosolic ribosome
GO:0046872 IEA metal ion binding
GO:0070006 IEA metalloaminopeptidase activity
GO:0070084 IEA protein initiator methionine removal
GO:0070527 IEA platelet aggregation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000140096 metap1-001 protein_coding Danio_rerio 0 660
ENSDART00000145136 metap1-002 protein_coding Danio_rerio 0 200
ENST00000296411 METAP1-001 protein_coding Homo_sapiens 0 1860
ENST00000503247 METAP1-006 nonsense_mediated_decay Homo_sapiens 0 303
ENST00000506238 METAP1-005 nonsense_mediated_decay Homo_sapiens 0 302
ENST00000506548 METAP1-009 processed_transcript Homo_sapiens 0 302
ENST00000507537 METAP1-004 nonsense_mediated_decay Homo_sapiens 0 647
ENST00000510107 METAP1-007 nonsense_mediated_decay Homo_sapiens 0 239
ENST00000510133 METAP1-011 protein_coding Homo_sapiens 0 627
ENST00000510209 METAP1-003 processed_transcript Homo_sapiens 0 484
ENST00000513097 METAP1-010 retained_intron Homo_sapiens 0 555
ENST00000513199 METAP1-008 processed_transcript Homo_sapiens 0 309
ENST00000514051 METAP1-002 protein_coding Homo_sapiens 0 569
ENST00000548175 RP11-367O10.1-001 processed_pseudogene Homo_sapiens 0 416

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