C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transformation related protein 53 inducible nuclear protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029865 Trp53inp1-001 ENSMUSG00000028211 10090 + 4:11156431-11174379 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029865
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029865 4.399±1.40 4.223±0.73 3.235±0.47 4.319±2.76 3.642±2.05 4.050±1.82 1.271±0.27 2.264±0.55 2.016±1.18 6.044±1.06 1.083±0.47 7.082±2.36 2.557±1.58 1.369±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006SX CIL_0006SX_0002 CGP 4:11051045-11174379
CIL_0000WT CIL_0000WT_0002 CGP 4:11156431-11204779

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005776 ISS autophagic vacuole
GO:0005829 ISS cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006914 IEA autophagy
GO:0006915 IEA apoptotic process
GO:0007050 IDA cell cycle arrest
GO:0008285 IMP negative regulation of cell proliferation
GO:0009408 IDA response to heat
GO:0010508 ISS positive regulation of autophagy
GO:0016209 IMP antioxidant activity
GO:0030336 IMP negative regulation of cell migration
GO:0031410 IEA cytoplasmic vesicle
GO:0034644 IDA cellular response to UV
GO:0043065 IDA positive regulation of apoptotic process
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0048102 ISS autophagic cell death
GO:0071361 IDA cellular response to ethanol
GO:0071447 IDA cellular response to hydroperoxide
GO:0072703 IDA cellular response to methyl methanesulfonate
GO:2001235 IGI positive regulation of apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000038294 tp53inp1-001 protein_coding Danio_rerio 0.0000000003 73
ENST00000342697 TP53INP1-001 protein_coding Homo_sapiens 0 1537
ENST00000448464 TP53INP1-002 protein_coding Homo_sapiens 0 737

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