C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulator of microtubule dynamics 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000029888 Rmdn1-001 ENSMUSG00000028229 10090 + 4:19575207-19606932 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartLiverPlacentaENSMUST00000029888
Transcript ID Bladder Brain Heart Liver Placenta
ENSMUST00000029888 6.202±1.28 6.460±0.00 5.290±0.35 4.815±1.20 3.581±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005739 IDA mitochondrion
GO:0005874 IEA microtubule
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000406452 RMDN1-001 protein_coding Homo_sapiens 0 1051
ENST00000430676 RMDN1-004 protein_coding Homo_sapiens 0 525
ENST00000517404 RMDN1-021 retained_intron Homo_sapiens 0 257
ENST00000517710 RMDN1-010 protein_coding Homo_sapiens 0 348
ENST00000517821 RMDN1-015 retained_intron Homo_sapiens 0 287
ENST00000518390 RMDN1-014 retained_intron Homo_sapiens 0 518
ENST00000518772 RMDN1-009 processed_transcript Homo_sapiens 1e-36 158
ENST00000519145 RMDN1-022 retained_intron Homo_sapiens 0 244
ENST00000519639 RMDN1-018 protein_coding Homo_sapiens 0 599
ENST00000519789 RMDN1-016 protein_coding Homo_sapiens 0 747
ENST00000519966 RMDN1-002 protein_coding Homo_sapiens 0 398
ENST00000520719 RMDN1-017 protein_coding Homo_sapiens 0 484
ENST00000521045 RMDN1-012 protein_coding Homo_sapiens 0 289
ENST00000522804 RMDN1-008 nonsense_mediated_decay Homo_sapiens 0 379
ENST00000522942 RMDN1-019 protein_coding Homo_sapiens 0 448
ENST00000523370 RMDN1-006 nonsense_mediated_decay Homo_sapiens 6e-28 128
ENST00000523911 RMDN1-007 protein_coding Homo_sapiens 0 771
ENST00000524172 RMDN1-013 nonsense_mediated_decay Homo_sapiens 0 547

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