C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: STRA6-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030011 1300002K09Rik-201 ENSMUSG00000028327 10090 + 4:45848947-45887008 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030011
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030011 1.006±0.89 0.145±0.05 0.106±0.00 0.576±0.50 0.441±0.04 3.531±1.36 0.020±0.01 3.372±0.47 49.377±44.70 0.367±0.07 0.017±0.00 0.392±0.20 1.118±0.70 0.067±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086Q CIL_00086Q_0002 VISTA 4:45528456-46131469

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005886 IDA plasma membrane
GO:0034633 IGI retinol transport
GO:0071939 IMP vitamin A import

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000531758 RP11-23J9.7-001 unitary_pseudogene Homo_sapiens 0 952

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