C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030284 Rnf11-001 ENSMUSG00000028557 10090 - 4:109451098-109476675 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030284
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030284 39.162±6.49 236.222±71.26 8.802±0.49 9.662±4.76 48.663±34.46 64.622±11.68 11.782±4.94 38.697±12.50 20.127±14.50 42.392±3.79 11.528±2.74 59.673±33.94 3.869±2.09 12.871±2.96

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 IPI ubiquitin ligase complex
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005768 IEA endosome
GO:0006511 IPI ubiquitin-dependent protein catabolic process
GO:0008270 IEA zinc ion binding
GO:0042787 IEA protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0051865 IEA protein autoubiquitination
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000242719 RNF11-001 protein_coding Homo_sapiens 0 2726
ENST00000392337 AC019178.2-001 processed_pseudogene Homo_sapiens 0 407
ENST00000427702 RNF11B-001 processed_pseudogene Homo_sapiens 0 444
ENST00000486691 RNF11-003 processed_transcript Homo_sapiens 0 876
ENST00000494873 RNF11-002 processed_transcript Homo_sapiens 0 645

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