C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mago-nashi homolog, proliferation-associated (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030348 Magoh-001 ENSMUSG00000028609 10090 + 4:107879755-107887424 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030348
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030348 21.307±6.51 23.094±2.69 36.727±4.11 42.319±9.31 15.979±3.22 17.100±7.42 20.663±3.62 35.696±5.52 46.464±29.00 25.576±3.36 15.320±1.11 27.800±27.29 156.481±103.66 23.091±8.90

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083F CIL_00083F_0002 VISTA 4:107302048-107904613

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000184 IEA nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000381 ISS regulation of alternative mRNA splicing, via spliceosome
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0006397 IEA mRNA processing
GO:0006417 IEA regulation of translation
GO:0007292 NAS female gamete generation
GO:0008150 ND biological_process
GO:0008380 IEA RNA splicing
GO:0035145 IEA exon-exon junction complex
GO:0044822 IEA poly(A) RNA binding
GO:0051028 IEA mRNA transport
GO:0071013 IEA catalytic step 2 spliceosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320756 MAGOHB-001 protein_coding Homo_sapiens 0 464
ENST00000371466 MAGOH-002 protein_coding Homo_sapiens 0 300
ENST00000371470 MAGOH-001 protein_coding Homo_sapiens 0 608
ENST00000398874 MAGOHB-008 retained_intron Homo_sapiens 0 213
ENST00000495868 MAGOH-003 processed_transcript Homo_sapiens 0 422
ENST00000537852 MAGOHB-003 retained_intron Homo_sapiens 0 213
ENST00000539554 MAGOHB-010 protein_coding Homo_sapiens 0 407
ENST00000540074 MAGOHB-009 nonsense_mediated_decay Homo_sapiens 0 213
ENST00000544850 MAGOHB-002 nonsense_mediated_decay Homo_sapiens 0 213
ENST00000545236 MAGOHB-005 nonsense_mediated_decay Homo_sapiens 0 407
ENST00000580926 MAGOH2-001 transcribed_processed_pseudogene Homo_sapiens 0 507
ENST00000584384 MAGOH2-002 processed_transcript Homo_sapiens 0 435
ENST00000605130 RP11-723P16.3-001 unprocessed_pseudogene Homo_sapiens 0 409

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