C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, subfamily Q, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030376 Kcnq4-001 ENSMUSG00000028631 10090 - 4:120696138-120747248 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030376
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030376 4.041±1.11 0.760±0.37 4.903±0.01 2.011±1.67 1.944±0.36 1.966±0.48 1.577±0.27 0.224±0.11 0.076±0.04 1.112±0.10 2.294±0.82 3.717±1.20 0.848±0.54 0.230±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009C0 CIL_0009C0_0002 VISTA 4:120091667-120696253

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005249 IMP voltage-gated potassium channel activity
GO:0005251 IBA delayed rectifier potassium channel activity
GO:0006813 IMP potassium ion transport
GO:0007605 IMP sensory perception of sound
GO:0008076 IEA voltage-gated potassium channel complex
GO:0016021 IC integral component of membrane
GO:0034765 IEA regulation of ion transmembrane transport
GO:0042472 IMP inner ear morphogenesis
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000125605 KCNQ4-201 protein_coding Danio_rerio 5e-31 141
ENST00000344425 KCNQ2-006 protein_coding Homo_sapiens 0 396
ENST00000344462 KCNQ2-012 protein_coding Homo_sapiens 0 396
ENST00000347132 KCNQ4-001 protein_coding Homo_sapiens 0 3404
ENST00000357249 KCNQ2-001 protein_coding Homo_sapiens 0 396
ENST00000359125 KCNQ2-003 protein_coding Homo_sapiens 0 396
ENST00000360480 KCNQ2-011 protein_coding Homo_sapiens 0 396
ENST00000370221 KCNQ2-009 retained_intron Homo_sapiens 0 396
ENST00000370224 KCNQ2-007 protein_coding Homo_sapiens 0 396
ENST00000443478 KCNQ4-003 protein_coding Homo_sapiens 0 1517
ENST00000506017 KCNQ4-002 processed_transcript Homo_sapiens 0 2350
ENST00000509682 KCNQ4-004 protein_coding Homo_sapiens 0 1602

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