C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: potassium voltage-gated channel, KQT-like subfamily, member 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000344425 KCNQ2-006 ENSG00000075043 9606 - 20:63433679-63472638 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartOvaryPlacentaTestisENST00000344425
Transcript ID Adrenal Brain Heart Ovary Placenta Testis
ENST00000344425 0.140±0.00 6.487±0.00 0.165±0.00 0.163±0.00 0.069±0.01 24.757±3.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000X3 CIL_0000X3_0001 CGP 20:63343310-63472638
CIL_00045E CIL_00045E_0001 CGP 20:63406039-63499315

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005249 TAS voltage-gated potassium channel activity
GO:0005251 IBA delayed rectifier potassium channel activity
GO:0005267 TAS potassium channel activity
GO:0005886 ISS plasma membrane
GO:0006811 IEA ion transport
GO:0006813 TAS potassium ion transport
GO:0007268 TAS synaptic transmission
GO:0007399 TAS nervous system development
GO:0007411 TAS axon guidance
GO:0008076 IEA voltage-gated potassium channel complex
GO:0016020 IEA membrane
GO:0030506 IPI ankyrin binding
GO:0033268 ISS node of Ranvier
GO:0034765 IEA regulation of ion transmembrane transport
GO:0043194 ISS axon initial segment
GO:0055085 IEA transmembrane transport
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000016491 Kcnq2-001 protein_coding Mus_musculus 0 1513
ENSMUST00000103051 Kcnq2-017 protein_coding Mus_musculus 0 1483
ENSMUST00000139458 Kcnq2-009 protein_coding Mus_musculus 0 1454
ENSMUST00000144592 Kcnq2-008 protein_coding Mus_musculus 0 1454
ENSMUST00000129073 Kcnq2-007 protein_coding Mus_musculus 0 1454
ENSMUST00000103047 Kcnq2-006 protein_coding Mus_musculus 0 1454
ENSMUST00000103048 Kcnq2-005 protein_coding Mus_musculus 0 1454
ENSMUST00000049792 Kcnq2-004 protein_coding Mus_musculus 0 1454
ENSMUST00000081528 Kcnq2-003 protein_coding Mus_musculus 0 1454
ENSMUST00000103050 Kcnq2-018 protein_coding Mus_musculus 0 1393
ENSMUST00000149964 Kcnq2-013 protein_coding Mus_musculus 0 1393
ENSMUST00000123336 Kcnq2-011 protein_coding Mus_musculus 0 1334
ENSMUST00000154164 Kcnq2-010 protein_coding Mus_musculus 0 1334
ENSMUST00000129361 Kcnq2-012 protein_coding Mus_musculus 0 1249
ENSMUST00000103049 Kcnq2-016 protein_coding Mus_musculus 0 1166
ENSMUST00000129695 Kcnq2-015 protein_coding Mus_musculus 0 913
ENSMUST00000140789 Kcnq2-002 retained_intron Mus_musculus 0 647
ENSMUST00000030376 Kcnq4-001 protein_coding Mus_musculus 0 396

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