C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine rich adaptor protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030469 Lurap1-001 ENSMUSG00000028701 10090 - 4:116132406-116144609 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030469
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030469 2.920±1.13 2.722±0.55 2.939±0.00 1.860±0.00 4.277±0.44 1.868±0.36 0.929±0.00 3.827±0.35 0.579±0.08 3.782±0.16 1.306±0.06 3.814±1.15 4.312±0.86 0.474±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001N5 CIL_0001N5_0002 CGP 4:116123840-116159849

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001819 ISS positive regulation of cytokine production
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005737 ISS cytoplasm
GO:0016477 IEA cell migration
GO:0031032 IEA actomyosin structure organization
GO:0042641 IEA actomyosin
GO:0043123 ISS positive regulation of I-kappaB kinase/NF-kappaB signaling

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000325006 AHCYL2-012 protein_coding Homo_sapiens 0.0000002 64
ENST00000371714 OSBPL9-004 protein_coding Homo_sapiens 0.0002 53
ENST00000371980 LURAP1-001 protein_coding Homo_sapiens 0 915
ENST00000371992 POMGNT1-002 protein_coding Homo_sapiens 0 531
ENST00000396420 POMGNT1-201 protein_coding Homo_sapiens 0 531
ENST00000425667 AC063976.7-001 processed_pseudogene Homo_sapiens 0.000001 60
ENST00000446544 AHCYL2-002 protein_coding Homo_sapiens 0.0000002 64

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