C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371992 POMGNT1-002 ENSG00000085998 9606 - 1:46188683-46220305 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001N5 CIL_0001N5_0001 CGP 1:46188682-46221261

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0006486 IEA protein glycosylation
GO:0006493 IDA protein O-linked glycosylation
GO:0008375 IEA acetylglucosaminyltransferase activity
GO:0016021 IEA integral component of membrane
GO:0047223 IDA beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120083 Pomgnt1-011 protein_coding Mus_musculus 0 3229
ENSMUST00000121052 Pomgnt1-010 protein_coding Mus_musculus 0 2811
ENSMUST00000106498 Pomgnt1-001 protein_coding Mus_musculus 0 2745
ENSMUST00000106494 Pomgnt1-003 protein_coding Mus_musculus 0 2499
ENSMUST00000106496 Pomgnt1-002 protein_coding Mus_musculus 0 1646
ENSMUST00000136855 Pomgnt1-008 retained_intron Mus_musculus 0 1312
ENSMUST00000133838 Pomgnt1-005 retained_intron Mus_musculus 0 767
ENSMUST00000030469 Lurap1-001 protein_coding Mus_musculus 0 531
ENSMUST00000151325 Pomgnt1-012 retained_intron Mus_musculus 0 440
ENSMUST00000155718 Pomgnt1-007 processed_transcript Mus_musculus 0 381
ENSMUST00000135982 Lurap1-002 processed_transcript Mus_musculus 0 361
ENSMUST00000127426 Pomgnt1-006 retained_intron Mus_musculus 0 292
ENSMUST00000147612 Pomgnt1-004 processed_transcript Mus_musculus 0 250
ENSMUST00000144311 Pomgnt1-009 processed_transcript Mus_musculus 9.99967e-42 176

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