C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ring finger protein 19B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030584 Rnf19b-201 ENSMUSG00000028793 10090 + 4:129058271-129085735 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000030584
Transcript ID Ovary
ENSMUST00000030584 5.809±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097K CIL_00097K_0002 VISTA 4:128504346-129105789

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0042267 IMP natural killer cell mediated cytotoxicity
GO:0044194 IDA cytolytic granule
GO:0072643 IMP interferon-gamma secretion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000235150 RNF19B-004 protein_coding Homo_sapiens 0 2872
ENST00000356990 RNF19B-002 protein_coding Homo_sapiens 0 2337
ENST00000373456 RNF19B-001 protein_coding Homo_sapiens 0 2892
ENST00000454567 AP000705.6-001 processed_pseudogene Homo_sapiens 0 267
ENST00000458209 RNF19BPY-001 processed_pseudogene Homo_sapiens 1e-33 148
ENST00000572263 AP000705.6-001 processed_pseudogene Homo_sapiens 0 267

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