C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 19B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000028793 Rnf19b 10090 + 4:129058271-129085886 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000030584 Rnf19b-201 129058271-129085735 protein_coding
  ENSMUST00000097874 Rnf19b-001 129058814-129084526 protein_coding
  ENSMUST00000130803 Rnf19b-002 129078971-129085886 protein_coding
  ENSMUST00000147238 Rnf19b-003 129083885-129085886 processed_transcript
  ENSMUST00000152565 Rnf19b-004 129058409-129080549 protein_coding
  ENSMUST00000168461 Rnf19b-202 129058271-129084526 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030584ENSMUST00000097874ENSMUST00000147238ENSMUST00000152565ENSMUST00000168461
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.809±0.00 N/A N/A
ENSMUST00000097874 4.584±0.89 N/A 1.974±0.00 5.725±0.88 5.937±0.47 8.439±0.04 3.232±0.96 4.223±1.31 4.725±2.43 8.565±2.85 2.184±0.34 22.976±7.34 9.768±6.08 71.135±19.64
ENSMUST00000147238 N/A 21.635±5.76 N/A N/A N/A 15.625±0.00 N/A N/A 5.909±0.00 N/A N/A 44.161±0.00 N/A N/A
ENSMUST00000152565 6.356±1.48 4.976±1.08 N/A 18.367±0.00 10.911±4.40 12.491±2.89 2.938±0.51 3.505±1.74 5.636±1.31 10.118±2.43 1.838±0.28 29.831±9.23 15.923±1.38 85.330±22.86
ENSMUST00000168461 4.434±2.05 N/A 11.431±1.19 22.247±1.10 4.907±2.44 6.859±0.00 2.449±0.76 4.372±1.82 8.434±1.81 1.954±0.00 4.026±0.80 13.043±1.04 7.675±3.08 97.063±34.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097K CIL_00097K_0002 VISTA 4:128504346-129105789

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0042267 IMP natural killer cell mediated cytotoxicity
GO:0044194 IDA cytolytic granule
GO:0072643 IMP interferon-gamma secretion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020284 RNF19B (1 of 2) ring finger protein 19B protein_coding Danio_rerio
ENSDARG00000060926 rnf19b ring finger protein 19B protein_coding Danio_rerio
ENSG00000116514 RNF19B ring finger protein 19B protein_coding Homo_sapiens

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