C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: R-spondin homolog (Xenopus laevis)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030687 Rspo1-001 ENSMUSG00000028871 10090 + 4:124986430-125009099 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030687
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030687 11.947±6.12 2.858±0.34 2.460±0.70 3.219±2.29 0.990±0.18 1.557±0.22 1.425±0.30 0.722±0.15 0.449±0.31 7.623±1.20 0.081±0.04 12.458±1.41 0.827±1.13 0.502±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001ZO CIL_0001ZO_0002 CGP 4:124986430-125055380

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001664 IEA G-protein coupled receptor binding
GO:0001934 IEA positive regulation of protein phosphorylation
GO:0002090 IEA regulation of receptor internalization
GO:0005102 IPI receptor binding
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0005634 IDA nucleus
GO:0007140 IMP male meiosis
GO:0008201 IDA heparin binding
GO:0010468 IMP regulation of gene expression
GO:0030177 IEA positive regulation of Wnt signaling pathway
GO:0060070 IPI canonical Wnt signaling pathway
GO:0090263 IEA positive regulation of canonical Wnt signaling pathway
GO:2000052 IMP positive regulation of non-canonical Wnt signaling pathway
GO:2000254 IMP regulation of male germ cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000356545 RSPO1-003 protein_coding Homo_sapiens 0 935
ENST00000401068 RSPO1-002 protein_coding Homo_sapiens 0 935
ENST00000612451 RSPO1-004 protein_coding Homo_sapiens 0 636
ENST00000615459 RSPO1-001 protein_coding Homo_sapiens 0 771

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