C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory (inhibitor) subunit 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030702 Ppp1r8-001 ENSMUSG00000028882 10090 - 4:132826929-132843169 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030702
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030702 17.349±3.94 11.202±1.61 17.159±2.86 25.654±12.98 12.599±4.83 9.041±2.72 8.934±1.39 11.679±1.29 16.478±12.64 12.800±1.84 5.785±0.70 17.910±5.18 16.123±5.50 8.749±3.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008WN CIL_0008WN_0002 VISTA 4:132816592-133418424

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003723 IEA RNA binding
GO:0004864 IEA protein phosphatase inhibitor activity
GO:0005634 IEA nucleus
GO:0005681 IEA spliceosomal complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006397 IEA mRNA processing
GO:0007275 IEA multicellular organismal development
GO:0008283 IMP cell proliferation
GO:0008380 IEA RNA splicing
GO:0008599 IDA protein phosphatase type 1 regulator activity
GO:0016607 IEA nuclear speck
GO:0043086 IEA negative regulation of catalytic activity
GO:0050790 IDA regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000236412 PPP1R8-003 protein_coding Homo_sapiens 0 885
ENST00000311772 PPP1R8-001 protein_coding Homo_sapiens 0 1591
ENST00000373931 PPP1R8-002 protein_coding Homo_sapiens 0 1441
ENST00000431586 PPP1R8-005 protein_coding Homo_sapiens 0 1308
ENST00000486634 PPP1R8-004 processed_transcript Homo_sapiens 0 433

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