C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein phosphatase 1, regulatory subunit 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000311772 PPP1R8-001 ENSG00000117751 9606 + 1:27830778-27851676 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000311772
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000311772 9.182±0.00 13.570±0.00 0.411±0.00 7.985±4.76 6.122±3.81 3.772±3.11 6.182±0.00 5.568±4.74 3.432±0.80 1.708±0.97 2.465±2.01 13.145±6.66 12.217±0.08 14.693±3.42

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003723 IEA RNA binding
GO:0004519 IEA endonuclease activity
GO:0004865 TAS protein serine/threonine phosphatase inhibitor activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005681 IEA spliceosomal complex
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006397 IEA mRNA processing
GO:0006401 TAS RNA catabolic process
GO:0008283 IEA cell proliferation
GO:0008380 IEA RNA splicing
GO:0008599 IEA protein phosphatase type 1 regulator activity
GO:0008995 TAS ribonuclease E activity
GO:0016607 IDA nuclear speck
GO:0043086 IEA negative regulation of catalytic activity
GO:0050790 IEA regulation of catalytic activity
GO:0090501 TAS RNA phosphodiester bond hydrolysis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030702 Ppp1r8-001 protein_coding Mus_musculus 0 1591
ENSMUST00000105919 Ppp1r8-005 protein_coding Mus_musculus 0 1437
ENSMUST00000131725 Ppp1r8-003 processed_transcript Mus_musculus 0 872
ENSMUST00000156777 Ppp1r8-004 processed_transcript Mus_musculus 0 385
ENSMUST00000148228 Ppp1r8-002 processed_transcript Mus_musculus 3e-26 124

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