C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: kinesin family member 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030806 Kif1b-007 ENSMUSG00000063077 10090 - 4:149233734-149307623 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartLiverLungMuscleOvaryPlacentaENSMUST00000030806
Transcript ID Bladder Breast Heart Liver Lung Muscle Ovary Placenta
ENSMUST00000030806 3.865±0.10 9.027±0.00 3.535±0.41 1.093±0.15 4.708±0.00 23.491±8.44 6.268±0.91 3.066±0.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082Y CIL_00082Y_0002 VISTA 4:148576108-149176659
CIL_00085P CIL_00085P_0002 VISTA 4:148597228-149198219
CIL_0007WE CIL_0007WE_0002 VISTA 4:148621504-149222572
CIL_0008IM CIL_0008IM_0002 VISTA 4:148744049-149345133
CIL_0003MR CIL_0003MR_0002 CGP 4:149149991-149307693
CIL_0006QX CIL_0006QX_0002 CGP 4:149176319-149426749

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005739 ISO mitochondrion
GO:0005871 IBA kinesin complex
GO:0005874 IEA microtubule
GO:0008017 IEA microtubule binding
GO:0008152 IEA metabolic process
GO:0008574 IBA plus-end-directed microtubule motor activity
GO:0016192 IBA vesicle-mediated transport
GO:0047497 IDA mitochondrion transport along microtubule

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000050915 kif1b-201 protein_coding Danio_rerio 0 1245
ENSDART00000141075 kif1b-002 protein_coding Danio_rerio 0 1245
ENSDART00000053807 kif1b-202 protein_coding Danio_rerio 0 728
ENSDART00000146458 kif1b-001 protein_coding Danio_rerio 0 728
ENST00000263934 KIF1B-002 protein_coding Homo_sapiens 0 2832
ENST00000377081 KIF1B-005 protein_coding Homo_sapiens 0 1594
ENST00000377083 KIF1B-004 protein_coding Homo_sapiens 0 4597
ENST00000377086 KIF1B-001 protein_coding Homo_sapiens 0 1594
ENST00000377093 KIF1B-003 protein_coding Homo_sapiens 0 4645
ENST00000497835 KIF1B-007 retained_intron Homo_sapiens 0 339
ENST00000620295 KIF1B-201 protein_coding Homo_sapiens 0 1554
ENST00000622724 KIF1B-202 protein_coding Homo_sapiens 0 1554

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