C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gamma-aminobutyric acid (GABA) A receptor, subunit gamma 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031119 Gabrg1-201 ENSMUSG00000001260 10090 - 5:70751047-70842617 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyLiverMuscleOvaryPlacentaENSMUST00000031119
Transcript ID Brain Breast Kidney Liver Muscle Ovary Placenta
ENSMUST00000031119 1.416±0.51 0.038±0.00 0.028±0.02 0.002±0.00 0.015±0.01 0.046±0.03 0.006±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002YW CIL_0002YW_0002 CGP 5:69573108-70842617
CIL_0002YX CIL_0002YX_0002 CGP 5:70751047-71095849

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004890 IEA GABA-A receptor activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005254 IEA chloride channel activity
GO:0007214 IEA gamma-aminobutyric acid signaling pathway
GO:0007268 IDA synaptic transmission
GO:0030054 IEA cell junction
GO:0034707 IEA chloride channel complex
GO:0043235 IEA receptor complex
GO:0045211 IEA postsynaptic membrane
GO:0050811 IEA GABA receptor binding
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295452 GABRG1-001 protein_coding Homo_sapiens 0 1720

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