C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: gamma-aminobutyric acid (GABA) A receptor, gamma 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000295452 GABRG1-001 ENSG00000163285 9606 - 4:46035769-46124081 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000295452
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000295452 0.026±0.00 0.088±0.00 8.723±0.36 0.050±0.01 0.077±0.00 0.030±0.00 0.036±0.03 0.003±0.00 0.003±0.00 0.012±0.00 0.159±0.07 0.013±0.00 0.199±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002YW CIL_0002YW_0001 CGP 4:44682200-46124081
CIL_0002YX CIL_0002YX_0001 CGP 4:46035769-46475230

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004890 IEA GABA-A receptor activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005254 IEA chloride channel activity
GO:0006810 IEA transport
GO:0006811 IEA ion transport
GO:0007214 IEA gamma-aminobutyric acid signaling pathway
GO:0007268 IEA synaptic transmission
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0034707 IEA chloride channel complex
GO:0043235 IEA receptor complex
GO:0045211 IEA postsynaptic membrane
GO:0050811 IEA GABA receptor binding
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031119 Gabrg1-201 protein_coding Mus_musculus 0 1720

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