C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin binding sialoprotein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031246 Ibsp-001 ENSMUSG00000029306 10090 + 5:104299171-104311469 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000031246
Transcript ID Adrenal Bladder Brain Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031246 0.070±0.00 0.022±0.00 3.017±4.16 0.067±0.01 0.013±0.01 0.026±0.00 0.075±0.06 0.062±0.02 0.088±0.05 0.523±0.78

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000BL CIL_0000BL_0002 CGP 5:104202617-104311469
CIL_0000BM CIL_0000BM_0002 CGP 5:104299171-104338611

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001649 IEA osteoblast differentiation
GO:0005615 ISS extracellular space
GO:0007155 ISS cell adhesion
GO:0016020 IEA membrane
GO:0030198 IDA extracellular matrix organization
GO:0031214 IEA biomineral tissue development
GO:0031988 ISS membrane-bounded vesicle
GO:0071363 IDA cellular response to growth factor stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000226284 IBSP-001 protein_coding Homo_sapiens 0 608

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