C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin-binding sialoprotein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000226284 IBSP-001 ENSG00000029559 9606 + 4:87799581-87812435 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainKidneyLungOvaryPlacentaTestisENST00000226284
Transcript ID Adipose Adrenal Brain Kidney Lung Ovary Placenta Testis
ENST00000226284 0.052±0.00 0.106±0.00 0.015±0.00 0.045±0.00 0.034±0.01 0.017±0.00 0.165±0.08 0.014±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000BL CIL_0000BL_0001 CGP 4:87650307-87812435
CIL_0000BM CIL_0000BM_0001 CGP 4:87799581-87846817

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001503 IEA ossification
GO:0001649 IDA osteoblast differentiation
GO:0003674 ND molecular_function
GO:0005576 TAS:IEA extracellular region
GO:0005615 ISS extracellular space
GO:0007155 ISS:IEA cell adhesion
GO:0016020 IDA membrane
GO:0030198 ISS extracellular matrix organization
GO:0031214 IEA biomineral tissue development
GO:0031988 ISS membrane-bounded vesicle
GO:0071363 ISS cellular response to growth factor stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031246 Ibsp-001 protein_coding Mus_musculus 0 608
ENSMUST00000105598 Cdk11b-003 protein_coding Mus_musculus 0.0001 53
ENSMUST00000105600 Cdk11b-002 protein_coding Mus_musculus 0.0001 53
ENSMUST00000067081 Cdk11b-001 protein_coding Mus_musculus 0.0001 53

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