C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coenzyme Q2 homolog, prenyltransferase (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031262 Coq2-001 ENSMUSG00000029319 10090 - 5:100654723-100674284 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031262
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031262 20.779±5.81 52.494±15.84 25.338±3.80 11.719±1.79 26.928±8.65 42.691±9.11 44.857±7.30 40.504±9.27 18.723±5.26 18.133±5.12 27.907±4.66 31.401±8.40 16.928±4.25 2.510±1.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007IV CIL_0007IV_0002 CGP 5:100553725-100675140
CIL_00069P CIL_00069P_0002 CGP 5:100654723-100719716

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002083 IEA 4-hydroxybenzoate decaprenyltransferase activity
GO:0004659 IEA prenyltransferase activity
GO:0005739 IDA mitochondrion
GO:0006071 IEA glycerol metabolic process
GO:0006744 IEA ubiquinone biosynthetic process
GO:0008299 IEA isoprenoid biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0047293 IEA 4-hydroxybenzoate nonaprenyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311461 COQ2-003 protein_coding Homo_sapiens 0 791
ENST00000311469 COQ2-001 protein_coding Homo_sapiens 0 881
ENST00000503391 COQ2-002 nonsense_mediated_decay Homo_sapiens 0 536
ENST00000503915 COQ2-004 nonsense_mediated_decay Homo_sapiens 0 623
ENST00000514935 COQ2-005 processed_transcript Homo_sapiens 0 292

Loading