C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007IV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000145287-ENSG00000173085 CGP 9606 4:83090048-83284914
GeneTranscriptPositionBiotype
ENSG00000145287 (PLAC8)
placenta-specific 8 		ENST00000311507 (PLAC8-001) 83090048-83114802 protein_coding
ENST00000411416 (PLAC8-005) 83090688-83109843 protein_coding
ENST00000426923 (PLAC8-004) 83092861-83114715 protein_coding
ENST00000505406 (PLAC8-006) 83090806-83137075 protein_coding
ENST00000509973 (PLAC8-003) 83090793-83114736 protein_coding
ENST00000515389 (PLAC8-002) 83090793-83114736 processed_transcript
ENSG00000173085 (COQ2)
coenzyme Q2 4-hydroxybenzoate polyprenyltransferase 		ENST00000311461 (COQ2-003) 83266697-83284765 protein_coding
ENST00000311469 (COQ2-001) 83263824-83284914 protein_coding
ENST00000503391 (COQ2-002) 83261536-83284795 nonsense_mediated_decay
ENST00000503915 (COQ2-004) 83263824-83279058 nonsense_mediated_decay
ENST00000514935 (COQ2-005) 83273543-83281596 processed_transcript
ENSG00000248401 (RP11-576N17.3)
 ENST00000450559 (RP11-576N17.3-001) 83247179-83248206 processed_pseudogene
ENSG00000250057 (RP11-576N17.5)
 ENST00000515670 (RP11-576N17.5-001) 83233512-83247213 lincRNA
ENSG00000250677 (RP11-576N17.2)
 ENST00000512083 (RP11-576N17.2-001) 83237303-83237444 processed_pseudogene
CIL_0007IV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029322-ENSMUSG00000029319 CGP 10090 5:100553725-100675140
GeneTranscriptPositionBiotype
ENSMUSG00000029319 (Coq2)
coenzyme Q2 homolog, prenyltransferase (yeast) 		ENSMUST00000031262 (Coq2-001) 100654723-100674284 protein_coding
ENSMUST00000126981 (Coq2-003) 100657943-100674249 nonsense_mediated_decay
ENSMUST00000127811 (Coq2-002) 100661866-100675140 protein_coding
ENSMUST00000135146 (Coq2-004) 100655255-100674156 nonsense_mediated_decay
ENSMUST00000135801 (Coq2-005) 100660172-100664419 protein_coding
ENSMUSG00000029322 (Plac8)
placenta-specific 8 		ENSMUST00000031264 (Plac8-001) 100553725-100572245 protein_coding
ENSMUST00000097437 (Plac8-004) 100553726-100562858 protein_coding
ENSMUST00000112910 (Plac8-003) 100553727-100563423 protein_coding
ENSMUST00000144595 (Plac8-002) 100562438-100572192 retained_intron
ENSMUSG00000085269 (Gm15777)
predicted gene 15777 		ENSMUST00000123463 (Gm15777-001) 100670859-100678105 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007IV_0001ENSG00000145287ENST00000311507ENST00000411416ENST00000426923ENST00000505406ENST00000509973ENST00000515389ENSG00000173085ENST00000311461ENST00000311469ENST00000503391ENST00000503915ENST00000514935ENSG00000248401ENST00000450559ENSG00000250057ENST00000515670ENSG00000250677ENST00000512083CIL_0007IV_0002ENSMUSG00000029319ENSMUST00000031262ENSMUST00000126981ENSMUST00000127811ENSMUST00000135146ENSMUST00000135801ENSMUSG00000029322ENSMUST00000031264ENSMUST00000097437ENSMUST00000112910ENSMUST00000144595ENSMUSG00000085269ENSMUST00000123463
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007IV_0001ENSG00000145287ENST00000311507ENST00000411416ENST00000426923ENST00000505406ENST00000509973ENST00000515389ENSG00000173085ENST00000311461ENST00000311469ENST00000503391ENST00000503915ENST00000514935ENSG00000248401ENST00000450559ENSG00000250057ENST00000515670ENSG00000250677ENST00000512083CIL_0007IV_0002ENSMUSG00000029319ENSMUST00000031262ENSMUST00000126981ENSMUST00000135146ENSMUST00000135801ENSMUSG00000029322ENSMUST00000031264ENSMUST00000097437ENSMUST00000112910ENSMUST00000144595ENSMUSG00000085269ENSMUST00000123463
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000145287 ENST00000311507 0.566±0.00 N/A 0.157±0.00 N/A 0.110±0.00 9.256±0.00 0.054±0.00 0.688±0.62 0.678±0.00 N/A N/A 1.226±0.00 2.279±0.00 0.169±0.00
ENST00000411416 1.084±0.00 N/A 0.479±0.00 0.144±0.00 N/A 3.422±0.00 N/A 0.152±0.00 1.165±1.02 21.511±0.00 N/A 2.459±0.93 26.978±24.80 0.301±0.00
ENST00000426923 N/A 1.585±0.00 N/A 0.076±0.00 0.500±0.32 N/A 0.021±0.00 0.016±0.00 0.086±0.00 N/A 0.026±0.00 0.156±0.00 N/A 0.044±0.02
ENST00000505406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.105±0.00
ENST00000509973 1.832±0.00 9.773±0.00 N/A 0.212±0.00 N/A 2.057±0.00 N/A 5.363±0.00 1.524±0.34 12.632±0.00 0.204±0.00 1.322±0.14 5.175±0.00 0.172±0.00
ENST00000515389 N/A N/A N/A 0.431±0.00 N/A N/A N/A 0.369±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000173085 ENST00000311461 N/A N/A N/A N/A N/A 0.597±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000311469 0.903±0.00 0.905±0.00 N/A 0.632±0.39 2.631±1.25 1.293±0.22 3.668±3.20 3.987±0.00 1.494±1.15 0.684±0.00 3.979±0.00 9.331±5.09 10.360±6.67 4.693±2.88
ENST00000503391 N/A N/A N/A N/A N/A N/A N/A N/A 0.344±0.00 N/A N/A N/A N/A N/A
ENST00000503915 3.260±0.00 3.249±0.00 N/A 0.344±0.00 1.033±0.00 1.175±0.70 0.782±0.57 0.888±0.00 1.074±0.00 1.015±0.00 1.141±0.00 N/A 1.195±0.00 3.268±0.00
ENST00000514935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.492±0.00 N/A N/A N/A
ENSG00000248401 ENST00000450559 N/A N/A N/A N/A 0.022±0.00 0.133±0.00 0.155±0.00 0.104±0.00 N/A N/A N/A N/A N/A 0.264±0.00
ENSG00000250057 ENST00000515670 N/A 0.125±0.00 N/A 0.181±0.00 0.085±0.00 N/A N/A N/A N/A N/A N/A 0.138±0.05 N/A 0.152±0.04
ENSG00000250677 ENST00000512083 N/A N/A N/A N/A N/A N/A N/A 0.266±0.00 N/A N/A N/A N/A N/A 0.241±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029319 ENSMUST00000031262 20.779±5.81 52.494±15.84 25.338±3.80 11.719±1.79 26.928±8.65 42.691±9.11 44.857±7.30 40.504±9.27 18.723±5.26 18.133±5.12 27.907±4.66 31.401±8.40 16.928±4.25 2.510±1.12
ENSMUST00000126981 16.884±1.12 54.618±42.57 N/A N/A 28.206±9.73 27.669±6.36 N/A 17.105±0.00 N/A 12.707±3.06 N/A 22.136±6.03 N/A 3.478±0.12
ENSMUST00000127811 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135146 N/A N/A N/A 23.142±0.00 N/A N/A N/A N/A N/A N/A N/A 32.237±0.00 42.334±5.71 2.280±0.00
ENSMUST00000135801 N/A N/A N/A N/A N/A N/A N/A N/A 4.814±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000029322 ENSMUST00000031264 136.628±125.67 4.581±0.58 33.114±0.26 0.650±0.07 57.171±18.21 442.899±90.16 2.231±1.21 24.866±6.39 50.092±41.67 41.886±5.65 0.905±0.95 39.704±8.52 465.892±214.30 N/A
ENSMUST00000097437 N/A N/A N/A 0.134±0.00 N/A N/A 0.382±0.00 N/A N/A N/A 0.192±0.00 N/A N/A 4.231±0.61
ENSMUST00000112910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.035±3.30
ENSMUST00000144595 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.166±0.08 N/A N/A N/A
ENSMUSG00000085269 ENSMUST00000123463 0.885±0.12 1.344±0.00 N/A 0.309±0.00 1.516±0.43 1.224±0.66 0.844±0.17 N/A 0.239±0.17 N/A 0.324±0.11 2.231±0.35 N/A 0.074±0.00

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