C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: USO1 vesicle docking factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031355 Uso1-201 ENSMUSG00000029407 10090 + 5:92137938-92202794 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031355
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031355 16.708±2.21 14.624±1.67 18.411±2.07 21.995±8.33 11.351±2.81 14.125±1.22 7.846±0.49 11.593±1.83 13.107±2.12 12.718±1.49 10.129±4.38 17.018±10.60 51.392±24.31 5.728±1.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051O CIL_00051O_0004 CGP 5:92052146-92202794

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0005515 IPI protein binding
GO:0005730 IEA nucleolus
GO:0005783 IBA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0005795 IBA Golgi stack
GO:0005829 IDA cytosol
GO:0006886 IDA intracellular protein transport
GO:0006888 IBA ER to Golgi vesicle-mediated transport
GO:0008565 IDA protein transporter activity
GO:0012507 IBA ER to Golgi transport vesicle membrane
GO:0044822 IEA poly(A) RNA binding
GO:0045056 IBA transcytosis
GO:0048211 IBA Golgi vesicle docking
GO:0048280 IEA vesicle fusion with Golgi apparatus
GO:0048471 IDA perinuclear region of cytoplasm
GO:0061025 IBA membrane fusion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264904 USO1-007 protein_coding Homo_sapiens 0 3391
ENST00000514213 USO1-001 protein_coding Homo_sapiens 0 3533

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