C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00051O_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000014790-ENSDARG00000019581 CGP 7955 1:25327574-25390224
GeneTranscriptPositionBiotype
ENSDARG00000014790 (g3bp2)
GTPase activating protein (SH3 domain) binding protein 2 		ENSDART00000046376 (g3bp2-201) 25327574-25348016 protein_coding
CIL_00051O_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000092127-ENSDARG00000087925 CGP 7955 1:25421062-25483997
GeneTranscriptPositionBiotype
ENSDARG00000087925 (USO1 (2 of 2))
USO1 vesicle transport factor 		ENSDART00000130805 (USO1 (2 of 2)-201) 25455782-25483997 protein_coding
ENSDARG00000092127 (G3BP2 (2 of 2))
GTPase activating protein (SH3 domain) binding protein 2 		ENSDART00000132535 (G3BP2 (2 of 2)-201) 25421062-25438574 protein_coding
CIL_00051O_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138757-ENSG00000138768 CGP 9606 4:75642782-75814286
GeneTranscriptPositionBiotype
ENSG00000138757 (G3BP2)
GTPase activating protein (SH3 domain) binding protein 2 		ENST00000357854 (G3BP2-003) 75644389-75673401 protein_coding
ENST00000359707 (G3BP2-001) 75642782-75673969 protein_coding
ENST00000395719 (G3BP2-002) 75642782-75673114 protein_coding
ENST00000499709 (G3BP2-015) 75658852-75724470 protein_coding
ENST00000502654 (G3BP2-006) 75655843-75673378 processed_transcript
ENST00000503660 (G3BP2-008) 75655197-75673157 protein_coding
ENST00000507133 (G3BP2-020) 75647024-75649102 retained_intron
ENST00000507252 (G3BP2-011) 75657601-75672681 protein_coding
ENST00000507701 (G3BP2-007) 75661515-75673350 retained_intron
ENST00000507745 (G3BP2-012) 75656941-75672681 protein_coding
ENST00000507947 (G3BP2-019) 75654914-75657694 retained_intron
ENST00000508510 (G3BP2-013) 75658843-75724375 protein_coding
ENST00000509100 (G3BP2-009) 75656991-75672927 protein_coding
ENST00000509561 (G3BP2-014) 75657675-75724445 protein_coding
ENST00000510902 (G3BP2-018) 75655066-75658896 nonsense_mediated_decay
ENST00000511146 (G3BP2-010) 75657561-75672711 protein_coding
ENST00000511868 (G3BP2-016) 75657609-75724525 protein_coding
ENST00000513927 (G3BP2-017) 75656973-75673146 processed_transcript
ENST00000515457 (G3BP2-005) 75657576-75673387 protein_coding
ENSG00000138768 (USO1)
USO1 vesicle transport factor 		ENST00000264904 (USO1-007) 75724598-75814286 protein_coding
ENST00000508454 (USO1-008) 75805009-75806555 retained_intron
ENST00000512893 (USO1-009) 75770123-75771138 retained_intron
ENST00000514213 (USO1-001) 75724593-75814213 protein_coding
CIL_00051O_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029405-ENSMUSG00000029407 CGP 10090 5:92052146-92202794
GeneTranscriptPositionBiotype
ENSMUSG00000029405 (G3bp2)
GTPase activating protein (SH3 domain) binding protein 2 		ENSMUST00000113127 (G3bp2-201) 92052161-92083735 protein_coding
ENSMUST00000164378 (G3bp2-202) 92052146-92082917 protein_coding
ENSMUST00000167918 (G3bp2-203) 92052146-92083557 protein_coding
ENSMUST00000169094 (G3bp2-204) 92052146-92083557 protein_coding
ENSMUSG00000029407 (Uso1)
USO1 vesicle docking factor 		ENSMUST00000031355 (Uso1-201) 92137938-92202794 protein_coding
ENSMUSG00000084111 (Gm15710)
predicted gene 15710 		ENSMUST00000121821 (Gm15710-001) 92140294-92140929 processed_pseudogene
ENSMUSG00000084745 (Gm25290)
predicted gene, 25290 		ENSMUST00000122796 (Gm25290-201) 92193322-92193465 snoRNA
ENSMUSG00000088712 (Gm22728)
predicted gene, 22728 		ENSMUST00000158087 (Gm22728-201) 92056064-92056192 snoRNA
ENSMUSG00000088949 (Gm24931)
predicted gene, 24931 		ENSMUST00000158324 (Gm24931-201) 92118177-92118283 rRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00051O_0001ENSDARG00000014790ENSDART00000046376CIL_00051O_0002ENSDARG00000087925ENSDART00000130805ENSDARG00000092127ENSDART00000132535CIL_00051O_0003ENSG00000138757ENST00000357854ENST00000359707ENST00000395719ENST00000499709ENST00000502654ENST00000503660ENST00000507133ENST00000507252ENST00000507701ENST00000507745ENST00000507947ENST00000508510ENST00000509100ENST00000509561ENST00000510902ENST00000511146ENST00000511868ENST00000513927ENST00000515457ENSG00000138768ENST00000264904ENST00000508454ENST00000512893ENST00000514213CIL_00051O_0004ENSMUSG00000029405ENSMUST00000113127ENSMUST00000164378ENSMUST00000167918ENSMUST00000169094ENSMUSG00000029407ENSMUST00000031355ENSMUSG00000084111ENSMUST00000121821ENSMUSG00000084745ENSMUST00000122796ENSMUSG00000088712ENSMUST00000158087ENSMUSG00000088949ENSMUST00000158324
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00051O_0001ENSDARG00000014790ENSDART00000046376CIL_00051O_0002ENSDARG00000087925ENSDART00000130805ENSDARG00000092127ENSDART00000132535CIL_00051O_0003ENSG00000138757ENST00000357854ENST00000359707ENST00000395719ENST00000507947ENSG00000138768ENST00000264904ENST00000514213CIL_00051O_0004ENSMUSG00000029405ENSMUST00000113127ENSMUST00000164378ENSMUST00000167918ENSMUST00000169094ENSMUSG00000029407ENSMUST00000031355ENSMUSG00000084111ENSMUST00000121821ENSMUSG00000084745ENSMUST00000122796ENSMUSG00000088712ENSMUST00000158087ENSMUSG00000088949ENSMUST00000158324
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000014790 ENSDART00000046376 N/A N/A N/A 13.671±6.19 N/A N/A 24.396±15.52 8.309±3.99 0.286±0.00 N/A 0.510±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000087925 ENSDART00000130805 N/A N/A N/A 0.136±0.00 N/A N/A 0.041±0.02 0.231±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000092127 ENSDART00000132535 N/A N/A N/A 1.164±0.87 N/A N/A 0.817±0.08 0.409±0.00 0.104±0.00 N/A 0.159±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138757 ENST00000357854 N/A N/A 5.548±0.00 11.765±0.00 9.830±0.00 9.062±0.00 3.953±0.54 6.728±0.00 11.391±0.00 6.014±0.00 7.676±0.00 17.688±3.33 7.426±5.70 32.530±0.00
ENST00000359707 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.875±0.00 N/A 3.868±0.00
ENST00000395719 7.122±0.00 6.616±0.00 1.772±0.00 16.438±0.00 10.629±2.84 13.404±5.62 3.392±0.00 5.111±0.00 7.762±0.00 4.590±0.00 15.423±8.75 6.467±2.99 3.003±0.94 10.007±0.20
ENST00000499709 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507133 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507252 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507947 N/A N/A N/A N/A N/A N/A N/A 9.095±0.00 N/A N/A N/A 24.478±0.00 13.666±0.00 28.288±0.00
ENST00000508510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509100 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509561 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510902 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000515457 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000138768 ENST00000264904 N/A N/A N/A 1.524±0.23 2.272±0.00 2.987±0.00 9.309±1.90 N/A 4.695±0.00 2.488±0.83 31.269±15.36 3.237±0.87 2.541±0.97 3.952±0.00
ENST00000508454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514213 15.297±0.00 4.568±0.00 5.861±0.00 8.100±1.10 14.544±2.43 14.518±7.94 5.216±3.76 12.401±9.12 13.489±4.83 8.169±1.60 34.428±0.00 11.971±5.55 9.373±0.94 22.854±2.70
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029405 ENSMUST00000113127 14.476±3.27 15.962±2.34 22.487±1.17 39.622±4.75 12.800±4.62 9.524±1.86 5.984±0.95 8.972±1.18 10.707±4.02 10.855±1.05 7.099±1.64 17.000±7.09 22.229±12.30 9.656±4.18
ENSMUST00000164378 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.383±0.00 2.317±0.58 2.316±0.00
ENSMUST00000167918 N/A 2.863±0.16 N/A N/A N/A N/A N/A N/A 1.465±0.00 N/A 2.979±0.00 N/A N/A 2.267±0.62
ENSMUST00000169094 3.530±1.31 3.342±0.57 6.957±0.00 11.270±2.99 3.194±1.32 1.655±0.44 2.344±0.21 2.002±0.62 2.645±0.53 2.126±0.36 3.416±0.96 2.806±0.41 3.424±1.49 2.934±0.00
ENSMUSG00000029407 ENSMUST00000031355 16.708±2.21 14.624±1.67 18.411±2.07 21.995±8.33 11.351±2.81 14.125±1.22 7.846±0.49 11.593±1.83 13.107±2.12 12.718±1.49 10.129±4.38 17.018±10.60 51.392±24.31 5.728±1.57
ENSMUSG00000084111 ENSMUST00000121821 0.064±0.01 0.105±0.03 0.154±0.03 7.075±9.82 0.124±0.00 0.173±0.11 0.054±0.00 0.055±0.00 9.205±20.35 N/A 0.300±0.26 0.472±0.26 0.246±0.19 0.058±0.00
ENSMUSG00000084745 ENSMUST00000122796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.354±0.00 N/A N/A
ENSMUSG00000088712 ENSMUST00000158087 N/A N/A 21.548±0.00 7.971±3.18 N/A N/A N/A N/A N/A 481.802±0.00 N/A 22.918±0.00 N/A N/A
ENSMUSG00000088949 ENSMUST00000158324 N/A N/A N/A N/A N/A N/A N/A N/A 33.702±0.00 N/A N/A N/A N/A N/A

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