C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: intraflagellar transport 81
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031426 Ift81-001 ENSMUSG00000029469 10090 - 5:122550204-122614518 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000031426
Transcript ID Bladder Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000031426 3.330±1.52 2.681±0.70 0.496±0.31 0.176±0.00 0.505±0.09 0.422±0.32 0.858±0.29 5.083±3.31 1.004±0.36 4.314±1.28

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005813 IDA centrosome
GO:0005929 IDA cilium
GO:0007275 IEA multicellular organismal development
GO:0007283 IEP spermatogenesis
GO:0015631 IBA:ISS tubulin binding
GO:0030154 IEA cell differentiation
GO:0030992 IDA intraciliary transport particle B
GO:0035735 ISS intraciliary transport involved in cilium morphogenesis
GO:0042073 IBA intraciliary transport
GO:0042384 IBA:ISS cilium assembly
GO:0097225 IDA sperm midpiece
GO:0097228 IDA sperm principal piece

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000242591 IFT81-003 protein_coding Homo_sapiens 0 2401
ENST00000361948 IFT81-001 protein_coding Homo_sapiens 0 1439
ENST00000546374 IFT81-004 protein_coding Homo_sapiens 0 761
ENST00000549009 IFT81-009 processed_transcript Homo_sapiens 0 388
ENST00000550156 IFT81-008 nonsense_mediated_decay Homo_sapiens 0 2098
ENST00000550748 IFT81-007 retained_intron Homo_sapiens 0 446
ENST00000551055 IFT81-006 processed_transcript Homo_sapiens 0 292
ENST00000551273 IFT81-005 nonsense_mediated_decay Homo_sapiens 0 357
ENST00000552912 IFT81-002 protein_coding Homo_sapiens 0 2433

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