C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Fez family zinc finger 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031709 Fezf1-201 ENSMUSG00000029697 10090 - 6:23245047-23248264 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000031709
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000031709 0.004±0.00 2.958±2.23 0.043±0.00 0.012±0.00 0.016±0.00 0.016±0.00 0.043±0.02 0.021±0.00 0.030±0.01 0.033±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00083M CIL_00083M_0002 VISTA 6:22971299-23575344
CIL_0003QN CIL_0003QN_0002 CGP 6:23072173-23248264
CIL_0003QO CIL_0003QO_0002 CGP 6:23245047-23839421

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IMP negative regulation of transcription from RNA polymerase II promoter
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001764 IMP neuron migration
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007411 IMP axon guidance
GO:0008285 IMP negative regulation of cell proliferation
GO:0021537 IMP telencephalon development
GO:0021772 IMP olfactory bulb development
GO:0021797 IGI forebrain anterior/posterior pattern specification
GO:0030900 IMP forebrain development
GO:0045666 IGI positive regulation of neuron differentiation
GO:0045893 IMP positive regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000010325 fezf1-001 protein_coding Danio_rerio 0 475
ENSDART00000103997 fezf2-001 protein_coding Danio_rerio 0 449
ENST00000427185 FEZF1-002 protein_coding Homo_sapiens 0 1096
ENST00000442488 FEZF1-001 protein_coding Homo_sapiens 0 2340

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