C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger CCCH type, antiviral 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031850 Zc3hav1-002 ENSMUSG00000029826 10090 - 6:38315668-38354603 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000031850
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000031850 5.141±2.00 15.171±0.44 0.161±0.07 13.302±6.37 10.354±1.33 1.266±0.40 1.835±0.46 5.596±3.64 5.739±1.59 12.252±3.93 5.935±0.00 0.486±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0003950 IEA NAD+ ADP-ribosyltransferase activity
GO:0005634 IDA nucleus
GO:0005737 ISO cytoplasm
GO:0005764 IMP lysosome
GO:0005770 IMP late endosome
GO:0008152 IEA metabolic process
GO:0009615 ISS response to virus
GO:0017151 ISO DEAD/H-box RNA helicase binding
GO:0032481 IDA positive regulation of type I interferon production
GO:0032781 ISO positive regulation of ATPase activity
GO:0039507 IMP suppression by virus of host molecular function
GO:0043123 ISO positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0045071 ISS negative regulation of viral genome replication
GO:0045087 IEA innate immune response
GO:0046872 IEA metal ion binding
GO:0051607 IEA defense response to virus
GO:0061014 ISS positive regulation of mRNA catabolic process
GO:0071360 IDA cellular response to exogenous dsRNA
GO:1900246 TAS positive regulation of RIG-I signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000242351 ZC3HAV1-001 protein_coding Homo_sapiens 0 599
ENST00000464606 ZC3HAV1-002 protein_coding Homo_sapiens 0 558
ENST00000471652 ZC3HAV1-003 protein_coding Homo_sapiens 0 599

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