C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: C-type lectin domain family 5, member a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000031975 Clec5a-003 ENSMUSG00000029915 10090 - 6:40576717-40585821 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031975
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031975 0.208±0.10 0.258±0.10 0.330±0.04 0.201±0.21 0.402±0.12 0.299±0.12 0.258±0.11 0.115±0.05 1.902±0.85 0.416±0.30 0.073±0.05 0.294±0.14 0.128±0.07 0.109±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003A2 CIL_0003A2_0002 CGP 6:40571357-40585821
CIL_0003A5 CIL_0003A5_0002 CGP 6:40574894-40613310

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000418498 CLEC5A-002 nonsense_mediated_decay Homo_sapiens 0 206
ENST00000438351 CLEC5A-006 protein_coding Homo_sapiens 2e-24 117
ENST00000439991 CLEC5A-004 protein_coding Homo_sapiens 0 206
ENST00000470595 CLEC5A-005 processed_transcript Homo_sapiens 1e-17 94
ENST00000497554 MGAM-003 processed_transcript Homo_sapiens 2e-17 94
ENST00000546910 CLEC5A-001 protein_coding Homo_sapiens 0 206
ENST00000551012 CLEC5A-003 protein_coding Homo_sapiens 0 206

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