C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: mago-nashi homolog B (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032307 Magohb-001 ENSMUSG00000030188 10090 - 6:131284388-131293244 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032307
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032307 1.426±0.73 0.282±0.02 8.760±1.38 4.947±2.27 0.504±0.30 0.838±0.31 1.041±0.39 1.108±0.25 5.656±5.88 1.401±0.31 1.929±0.32 3.926±4.57 7.686±3.47 2.002±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000K6 CIL_0000K6_0002 CGP 6:131284388-131353597

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006397 IEA mRNA processing
GO:0008150 ND biological_process
GO:0008380 IEA RNA splicing
GO:0044822 IEA poly(A) RNA binding
GO:0051028 IEA mRNA transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000320756 MAGOHB-001 protein_coding Homo_sapiens 0 669
ENST00000398874 MAGOHB-008 retained_intron Homo_sapiens 0 305
ENST00000537852 MAGOHB-003 retained_intron Homo_sapiens 0 368
ENST00000539554 MAGOHB-010 protein_coding Homo_sapiens 0 532
ENST00000540074 MAGOHB-009 nonsense_mediated_decay Homo_sapiens 0 270
ENST00000543929 MAGOHB-007 nonsense_mediated_decay Homo_sapiens 0 228
ENST00000544176 MAGOHB-004 retained_intron Homo_sapiens 0 368
ENST00000544850 MAGOHB-002 nonsense_mediated_decay Homo_sapiens 0 361
ENST00000545236 MAGOHB-005 nonsense_mediated_decay Homo_sapiens 0 486
ENST00000546173 MAGOHB-006 nonsense_mediated_decay Homo_sapiens 0 228
ENST00000605130 RP11-723P16.3-001 unprocessed_pseudogene Homo_sapiens 0 547

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