C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032421 St8sia1-001 ENSMUSG00000030283 10090 - 6:142821545-142964452 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032421
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032421 0.032±0.01 0.251±0.10 0.022±0.01 4.311±2.88 1.241±0.40 0.091±0.04 0.048±0.00 8.705±0.30 0.026±0.02 0.187±0.06 0.032±0.02 0.300±0.17 0.039±0.04 0.101±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00090B CIL_00090B_0002 VISTA 6:142366341-142969080
CIL_0005PQ CIL_0005PQ_0002 CGP 6:142821545-143100107

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003828 IEA alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity
GO:0006486 IEA protein glycosylation
GO:0006665 IEA sphingolipid metabolic process
GO:0008284 IDA positive regulation of cell proliferation
GO:0030173 IEA integral component of Golgi membrane
GO:0034605 IDA cellular response to heat
GO:0097503 IEA sialylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261197 ST8SIA1-007 nonsense_mediated_decay Homo_sapiens 0 651
ENST00000381424 ST8SIA1-003 protein_coding Homo_sapiens 0 346
ENST00000396037 ST8SIA1-001 protein_coding Homo_sapiens 0 1343
ENST00000404299 ST8SIA1-002 protein_coding Homo_sapiens 0 346
ENST00000508924 ST8SIA1-009 processed_transcript Homo_sapiens 0 518
ENST00000540824 ST8SIA1-006 protein_coding Homo_sapiens 0 603
ENST00000541868 ST8SIA1-011 protein_coding Homo_sapiens 0 630
ENST00000545494 ST8SIA1-008 processed_transcript Homo_sapiens 0 828
ENST00000545524 ST8SIA1-013 processed_transcript Homo_sapiens 0 318

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