C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: oculocutaneous albinism II
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032633 Oca2-001 ENSMUSG00000030450 10090 + 7:56239760-56536517 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainOvaryPlacentaTestisENSMUST00000032633
Transcript ID Adrenal Brain Ovary Placenta Testis
ENSMUST00000032633 2.600±0.49 0.091±0.04 2.633±1.71 0.015±0.00 0.135±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006LG CIL_0006LG_0002 CGP 7:56050155-56536517

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005765 IEA lysosomal membrane
GO:0005789 IEA endoplasmic reticulum membrane
GO:0007286 IMP spermatid development
GO:0008283 IMP cell proliferation
GO:0010008 IEA endosome membrane
GO:0016021 IEA integral component of membrane
GO:0030318 IMP melanocyte differentiation
GO:0033162 IEA melanosome membrane
GO:0042438 IMP melanin biosynthetic process
GO:0043473 IMP pigmentation
GO:0048066 IMP developmental pigmentation
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000353809 OCA2-002 protein_coding Homo_sapiens 0 1559
ENST00000354638 OCA2-001 protein_coding Homo_sapiens 0 1982
ENST00000619392 AC243653.2-201 protein_coding Homo_sapiens 0 368

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