C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor-like 6 interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000032888 Arl6ip1-201 ENSMUSG00000030654 10090 - 7:118118891-118129625 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032888
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032888 44.601±4.27 28.741±2.36 57.492±3.44 67.769±25.02 39.770±8.37 25.950±3.37 10.210±0.55 133.035±14.76 72.720±26.71 56.055±6.81 3.602±0.87 28.578±9.19 99.717±50.60 56.475±26.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007GM CIL_0007GM_0003 CGP 7:118118891-118243637

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005784 IDA Sec61 translocon complex
GO:0005829 IDA cytosol
GO:0006613 IDA cotranslational protein targeting to membrane
GO:0016020 IEA membrane
GO:0016021 IDA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304414 ARL6IP1-001 protein_coding Homo_sapiens 0 841
ENST00000431356 ARL6IP1P2-001 processed_pseudogene Homo_sapiens 0 448
ENST00000545836 ARL6IP1P1-001 processed_pseudogene Homo_sapiens 0 529
ENST00000546206 ARL6IP1-002 protein_coding Homo_sapiens 0 791
ENST00000562234 ARL6IP1-006 protein_coding Homo_sapiens 0 224
ENST00000562819 ARL6IP1-008 protein_coding Homo_sapiens 0 213
ENST00000563861 ARL6IP1-003 nonsense_mediated_decay Homo_sapiens 0 398
ENST00000566391 ARL6IP1-005 retained_intron Homo_sapiens 0 233
ENST00000567078 RP11-1035H13.3-001 protein_coding Homo_sapiens 0 691
ENST00000567969 ARL6IP1-004 retained_intron Homo_sapiens 0 399
ENST00000569976 ARL6IP1-007 retained_intron Homo_sapiens 0 569

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