C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: leucine carboxyl methyltransferase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033025 Lcmt1-201 ENSMUSG00000030763 10090 + 7:123377982-123430358 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033025
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033025 17.732±5.75 13.093±4.73 14.286±1.39 21.060±5.15 8.860±3.36 12.073±0.79 8.692±0.90 15.296±1.61 9.600±5.11 10.135±1.87 14.013±0.55 14.201±5.42 14.401±6.61 7.882±3.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003XC CIL_0003XC_0002 CGP 7:123279150-123430358
CIL_0003XX CIL_0003XX_0002 CGP 7:123377982-123468003

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003880 ISO protein C-terminal carboxyl O-methyltransferase activity
GO:0005515 IEA protein binding
GO:0005829 IDA cytosol
GO:0006479 IMP protein methylation
GO:0006481 ISO C-terminal protein methylation
GO:0008276 IDA protein methyltransferase activity
GO:0010906 IMP regulation of glucose metabolic process
GO:0031333 IEA negative regulation of protein complex assembly
GO:0042981 IEA regulation of apoptotic process
GO:0090266 IEA regulation of mitotic cell cycle spindle assembly checkpoint

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000380962 LCMT1-003 nonsense_mediated_decay Homo_sapiens 0 979
ENST00000380966 LCMT1-011 protein_coding Homo_sapiens 0 466
ENST00000399069 LCMT1-001 protein_coding Homo_sapiens 0 1070
ENST00000564011 LCMT1-002 nonsense_mediated_decay Homo_sapiens 0 477
ENST00000572761 LCMT1-007 protein_coding Homo_sapiens 0 285
ENST00000572869 LCMT1-012 processed_transcript Homo_sapiens 0 614
ENST00000575396 LCMT1-009 protein_coding Homo_sapiens 0 207
ENST00000576625 LCMT1-010 nonsense_mediated_decay Homo_sapiens 0 529

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