C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclic nucleotide gated channel alpha 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033187 Cnga4-201 ENSMUSG00000030897 10090 + 7:105404568-105408738 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033187
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033187 0.107±0.04 0.131±0.06 0.021±0.00 0.340±0.24 0.135±0.03 0.160±0.11 0.038±0.02 0.080±0.02 0.019±0.01 0.065±0.02 0.018±0.00 0.211±0.11 0.041±0.04 2.503±1.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004B5 CIL_0004B5_0002 CGP 7:105404568-105470898

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 TAS ion channel activity
GO:0005222 IBA intracellular cAMP activated cation channel activity
GO:0005223 IBA intracellular cGMP activated cation channel activity
GO:0005249 IBA voltage-gated potassium channel activity
GO:0005887 IBA integral component of plasma membrane
GO:0007603 IBA phototransduction, visible light
GO:0007608 IMP sensory perception of smell
GO:0030552 IEA cAMP binding
GO:0030553 IBA cGMP binding
GO:0042391 IBA regulation of membrane potential
GO:0071805 IBA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000379936 CNGA4-001 protein_coding Homo_sapiens 0 2154
ENST00000533426 CNGA4-003 protein_coding Homo_sapiens 0 582

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