C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: crystallin, mu
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033198 Crym-001 ENSMUSG00000030905 10090 - 7:120186380-120202111 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033198
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033198 0.730±0.30 0.577±0.28 0.807±0.15 24.394±25.32 2.435±0.77 1.439±0.68 0.179±0.06 13.503±2.23 0.496±0.39 1.747±0.80 1.788±0.82 0.751±0.25 0.751±0.18 0.042±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003H0 CIL_0003H0_0002 CGP 7:120173858-120202111

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0003714 IEA transcription corepressor activity
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0007605 IEA sensory perception of sound
GO:0042403 IMP thyroid hormone metabolic process
GO:0042562 IMP hormone binding
GO:0042803 IEA protein homodimerization activity
GO:0047127 IEA thiomorpholine-carboxylate dehydrogenase activity
GO:0050661 IEA NADP binding
GO:0055114 IEA oxidation-reduction process
GO:0070062 IEA extracellular vesicular exosome
GO:0070324 IEA thyroid hormone binding
GO:0070327 IEA thyroid hormone transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000219599 CRYM-001 protein_coding Homo_sapiens 0 1077
ENST00000543948 CRYM-201 protein_coding Homo_sapiens 0 1077
ENST00000571666 CRYM-007 retained_intron Homo_sapiens 0 713
ENST00000572914 CRYM-006 protein_coding Homo_sapiens 0 457
ENST00000574448 CRYM-002 nonsense_mediated_decay Homo_sapiens 0 551
ENST00000576703 CRYM-004 protein_coding Homo_sapiens 0 885

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