C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: uromodulin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000033263 Umod-201 ENSMUSG00000030963 10090 - 7:119462866-119479255 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000033263
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000033263 0.043±0.03 0.024±0.00 0.065±0.05 0.059±0.02 0.052±0.01 1360.281±489.42 0.025±0.02 0.181±0.07 0.143±0.07 0.033±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007FE CIL_0007FE_000H CGP 7:119442544-119479255
CIL_00028L CIL_00028L_0002 CGP 7:119462866-119523482

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000922 ISS spindle pole
GO:0005509 IEA calcium ion binding
GO:0005615 IEA extracellular space
GO:0005794 IEA Golgi apparatus
GO:0007157 IEA heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007159 IEA leukocyte cell-cell adhesion
GO:0007588 IMP excretion
GO:0010033 IEA response to organic substance
GO:0016323 ISS basolateral plasma membrane
GO:0016324 ISS apical plasma membrane
GO:0019864 IEA IgG binding
GO:0031225 ISS anchored component of membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0045121 IEA membrane raft
GO:0045177 IEA apical part of cell
GO:0048878 IMP chemical homeostasis
GO:0070062 IEA extracellular vesicular exosome
GO:0072218 IEP metanephric ascending thin limb development
GO:0072221 IEP metanephric distal convoluted tubule development
GO:0072233 IEP metanephric thick ascending limb development
GO:0072372 ISS primary cilium
GO:1990266 IEA neutrophil migration
GO:2000021 IMP regulation of ion homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302509 UMOD-201 protein_coding Homo_sapiens 0 1386
ENST00000396134 UMOD-002 protein_coding Homo_sapiens 0 1351
ENST00000396138 UMOD-001 protein_coding Homo_sapiens 0 1386
ENST00000570331 UMOD-019 processed_transcript Homo_sapiens 0 507
ENST00000570689 UMOD-008 protein_coding Homo_sapiens 0 1376

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